Python pandas reading excel

In this tutorial, you’ll learn how to use Python and Pandas to read Excel files using the Pandas read_excel function. Excel files are everywhere – and while they may not be the ideal data type for many data scientists, knowing how to work with them is an essential skill.

By the end of this tutorial, you’ll have learned:

• How to use the Pandas read_excel function to read an Excel file
• How to read specify an Excel sheet name to read into Pandas
• How to read multiple Excel sheets or files
• How to certain columns from an Excel file in Pandas
• How to skip rows when reading Excel files in Pandas
• And more

Let’s get started!

The Quick Answer: Use Pandas read_excel to Read Excel Files

To read Excel files in Python’s Pandas, use the read_excel() function. You can specify the path to the file and a sheet name to read, as shown below:

# Reading an Excel File in Pandas
import pandas as pd

df = pd.read_excel('/Users/datagy/Desktop/Sales.xlsx')

# With a Sheet Name
df = pd.read_excel(
   io='/Users/datagy/Desktop/Sales.xlsx'
   sheet_name ='North'
)

In the following sections of this tutorial, you’ll learn more about the Pandas read_excel() function to better understand how to customize reading Excel files.

Understanding the Pandas read_excel Function

The Pandas read_excel() function has a ton of different parameters. In this tutorial, you’ll learn how to use the main parameters available to you that provide incredible flexibility in terms of how you read Excel files in Pandas.

Parameter	Description	Available Option
io=	The string path to the workbook.	URL to file, path to file, etc.
sheet_name=	The name of the sheet to read. Will default to the first sheet in the workbook (position 0).	Can read either strings (for the sheet name), integers (for position), or lists (for multiple sheets)
usecols=	The columns to read, if not all columns are to be read	Can be strings of columns, Excel-style columns (“A:C”), or integers representing positions columns
dtype=	The datatypes to use for each column	Dictionary with columns as keys and data types as values
skiprows=	The number of rows to skip from the top	Integer value representing the number of rows to skip
nrows=	The number of rows to parse	Integer value representing the number of rows to read

The table above highlights some of the key parameters available in the Pandas .read_excel() function. The full list can be found in the official documentation. In the following sections, you’ll learn how to use the parameters shown above to read Excel files in different ways using Python and Pandas.

As shown above, the easiest way to read an Excel file using Pandas is by simply passing in the filepath to the Excel file. The io= parameter is the first parameter, so you can simply pass in the string to the file.

The parameter accepts both a path to a file, an HTTP path, an FTP path or more. Let’s see what happens when we read in an Excel file hosted on my Github page.

# Reading an Excel file in Pandas
import pandas as pd

df = pd.read_excel('https://github.com/datagy/mediumdata/raw/master/Sales.xlsx')
print(df.head())

# Returns:
#         Date Customer  Sales
# 0 2022-04-01        A    191
# 1 2022-04-02        B    727
# 2 2022-04-03        A    782
# 3 2022-04-04        B    561
# 4 2022-04-05        A    969

If you’ve downloaded the file and taken a look at it, you’ll notice that the file has three sheets? So, how does Pandas know which sheet to load? By default, Pandas will use the first sheet (positionally), unless otherwise specified.

In the following section, you’ll learn how to specify which sheet you want to load into a DataFrame.

How to Specify Excel Sheet Names in Pandas read_excel

As shown in the previous section, you learned that when no sheet is specified, Pandas will load the first sheet in an Excel workbook. In the workbook provided, there are three sheets in the following structure:

Sales.xlsx
|---East
|---West
|---North

Because of this, we know that the data from the sheet “East” was loaded. If we wanted to load the data from the sheet “West”, we can use the sheet_name= parameter to specify which sheet we want to load.

The parameter accepts both a string as well as an integer. If we were to pass in a string, we can specify the sheet name that we want to load.

Let’s take a look at how we can specify the sheet name for 'West':

# Specifying an Excel Sheet to Load by Name
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name='West')
print(df.head())

# Returns:
#         Date Customer  Sales
# 0 2022-04-01        A    504
# 1 2022-04-02        B    361
# 2 2022-04-03        A    694
# 3 2022-04-04        B    702
# 4 2022-04-05        A    255

Similarly, we can load a sheet name by its position. By default, Pandas will use the position of 0, which will load the first sheet. Say we wanted to repeat our earlier example and load the data from the sheet named 'West', we would need to know where the sheet is located.

Because we know the sheet is the second sheet, we can pass in the 1st index:

# Specifying an Excel Sheet to Load by Position
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name=1)
print(df.head())

# Returns:
#         Date Customer  Sales
# 0 2022-04-01        A    504
# 1 2022-04-02        B    361
# 2 2022-04-03        A    694
# 3 2022-04-04        B    702
# 4 2022-04-05        A    255

We can see that both of these methods returned the same sheet’s data. In the following section, you’ll learn how to specify which columns to load when using the Pandas read_excel function.

How to Specify Columns Names in Pandas read_excel

There may be many times when you don’t want to load every column in an Excel file. This may be because the file has too many columns or has different columns for different worksheets.

In order to do this, we can use the usecols= parameter. It’s a very flexible parameter that lets you specify:

• A list of column names,
• A string of Excel column ranges,
• A list of integers specifying the column indices to load

Most commonly, you’ll encounter people using a list of column names to read in. Each of these columns are comma separated strings, contained in a list.

Let’s load our DataFrame from the example above, only this time only loading the 'Customer' and 'Sales' columns:

# Specifying Columns to Load by Name
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    usecols=['Customer', 'Sales'])
print(df.head())

# Returns:
#   Customer  Sales
# 0        A    191
# 1        B    727
# 2        A    782
# 3        B    561
# 4        A    969

We can see that by passing in the list of strings representing the columns, we were able to parse those columns only.

If we wanted to use Excel changes, we could also specify columns 'B:C'. Let’s see what this looks like below:

# Specifying Columns to Load by Excel Range
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    usecols='B:C')
print(df.head())

# Returns:
#   Customer  Sales
# 0        A    191
# 1        B    727
# 2        A    782
# 3        B    561
# 4        A    969

Finally, we can also pass in a list of integers that represent the positions of the columns we wanted to load. Because the columns are the second and third columns, we would load a list of integers as shown below:

# Specifying Columns to Load by Their Position
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    usecols=[1,2])
print(df.head())

# Returns:
#   Customer  Sales
# 0        A    191
# 1        B    727
# 2        A    782
# 3        B    561
# 4        A    969

In the following section, you’ll learn how to specify data types when reading Excel files.

How to Specify Data Types in Pandas read_excel

Pandas makes it easy to specify the data type of different columns when reading an Excel file. This serves three main purposes:

1. Preventing data from being read incorrectly
2. Speeding up the read operation
3. Saving memory

You can pass in a dictionary where the keys are the columns and the values are the data types. This ensures that data are ready correctly. Let’s see how we can specify the data types for our columns.

# Specifying Data Types for Columns When Reading Excel Files
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    dtype={'date':'datetime64', 'Customer': 'object', 'Sales':'int'})
print(df.head())

# Returns:
#   Customer  Sales
#         Date Customer  Sales
# 0 2022-04-01        A    191
# 1 2022-04-02        B    727
# 2 2022-04-03        A    782
# 3 2022-04-04        B    561
# 4 2022-04-05        A    969

It’s important to note that you don’t need to pass in all the columns for this to work. In the next section, you’ll learn how to skip rows when reading Excel files.

How to Skip Rows When Reading Excel Files in Pandas

In some cases, you’ll encounter files where there are formatted title rows in your Excel file, as shown below:

If we were to read the sheet 'North', we would get the following returned:

# Reading a poorly formatted Excel file
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name='North')
print(df.head())

# Returns:
#            North Sales Unnamed: 1 Unnamed: 2
# 0     Totals Available        NaN        NaN
# 1                 Date   Customer      Sales
# 2  2022-04-01 00:00:00          A        164
# 3  2022-04-02 00:00:00          B        612
# 4  2022-04-03 00:00:00          A        260

Pandas makes it easy to skip a certain number of rows when reading an Excel file. This can be done using the skiprows= parameter. We can see that we need to skip two rows, so we can simply pass in the value 2, as shown below:

# Reading a Poorly Formatted File Correctly
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name='North',
    skiprows=2)
print(df.head())

# Returns:
#         Date Customer  Sales
# 0 2022-04-01        A    164
# 1 2022-04-02        B    612
# 2 2022-04-03        A    260
# 3 2022-04-04        B    314
# 4 2022-04-05        A    215

This read the file much more accurately! It can be a lifesaver when working with poorly formatted files. In the next section, you’ll learn how to read multiple sheets in an Excel file in Pandas.

How to Read Multiple Sheets in an Excel File in Pandas

Pandas makes it very easy to read multiple sheets at the same time. This can be done using the sheet_name= parameter. In our earlier examples, we passed in only a single string to read a single sheet. However, you can also pass in a list of sheets to read multiple sheets at once.

Let’s see how we can read our first two sheets:

# Reading Multiple Excel Sheets at Once in Pandas
import pandas as pd

dfs = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name=['East', 'West'])

print(type(dfs))

# Returns: <class 'dict'>

In the example above, we passed in a list of sheets to read. When we used the type() function to check the type of the returned value, we saw that a dictionary was returned.

Each of the sheets is a key of the dictionary with the DataFrame being the corresponding key’s value. Let’s see how we can access the 'West' DataFrame:

# Reading Multiple Excel Sheets in Pandas
import pandas as pd

dfs = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name=['East', 'West'])

print(dfs.get('West').head())

# Returns: 
#         Date Customer  Sales
# 0 2022-04-01        A    504
# 1 2022-04-02        B    361
# 2 2022-04-03        A    694
# 3 2022-04-04        B    702
# 4 2022-04-05        A    255

You can also read all of the sheets at once by specifying None for the value of sheet_name=. Similarly, this returns a dictionary of all sheets:

# Reading Multiple Excel Sheets in Pandas
import pandas as pd

dfs = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    sheet_name=None)

In the next section, you’ll learn how to read multiple Excel files in Pandas.

How to Read Only n Lines When Reading Excel Files in Pandas

When working with very large Excel files, it can be helpful to only sample a small subset of the data first. This allows you to quickly load the file to better be able to explore the different columns and data types.

This can be done using the nrows= parameter, which accepts an integer value of the number of rows you want to read into your DataFrame. Let’s see how we can read the first five rows of the Excel sheet:

# Reading n Number of Rows of an Excel Sheet
import pandas as pd

df = pd.read_excel(
    io='https://github.com/datagy/mediumdata/raw/master/Sales.xlsx',
    nrows=5)
print(df)

# Returns:
#         Date Customer  Sales
# 0 2022-04-01        A    191
# 1 2022-04-02        B    727
# 2 2022-04-03        A    782
# 3 2022-04-04        B    561
# 4 2022-04-05        A    969

Conclusion

In this tutorial, you learned how to use Python and Pandas to read Excel files into a DataFrame using the .read_excel() function. You learned how to use the function to read an Excel, specify sheet names, read only particular columns, and specify data types. You then learned how skip rows, read only a set number of rows, and read multiple sheets.

Additional Resources

To learn more about related topics, check out the tutorials below:

• Pandas Dataframe to CSV File – Export Using .to_csv()
• Combine Data in Pandas with merge, join, and concat
• Introduction to Pandas for Data Science
• Summarizing and Analyzing a Pandas DataFrame

Хотя многие Data Scientist’ы больше привыкли работать с CSV-файлами, на практике очень часто приходится сталкиваться с обычными Excel-таблицами. Поэтому сегодня мы расскажем, как читать Excel-файлы в Pandas, а также рассмотрим основные возможности Python-библиотеки OpenPyXL для чтения метаданных ячеек.

Дополнительные зависимости для возможности чтения Excel таблиц

Для чтения таблиц Excel в Pandas требуются дополнительные зависимости:

• xlrd поддерживает старые и новые форматы MS Excel [1];
• OpenPyXL поддерживает новые форматы MS Excel (.xlsx) [2];
• ODFpy поддерживает свободные форматы OpenDocument (.odf, .ods и .odt) [3];
• pyxlsb поддерживает бинарные MS Excel файлы (формат .xlsb) [4].

Мы рекомендуем установить только OpenPyXL, поскольку он нам пригодится в дальнейшем. Для этого в командной строке прописывается следующая операция:

pip install openpyxl

Затем в Pandas нужно указать путь к Excel-файлу и одну из установленных зависимостей. Python-код выглядит следующим образом:

import pandas as pd
pd.read_excel(io='temp1.xlsx', engine='openpyxl')
#
     Name  Age  Weight
0    Alex   35      87
1   Lesha   57      72
2  Nastya   21      64

Читаем несколько листов

Excel-файл может содержать несколько листов. В Pandas, чтобы прочитать конкретный лист, в аргументе нужно указать sheet_name. Можно указать список названий листов, тогда Pandas вернет словарь (dict) с объектами DataFrame:

dfs = pd.read_excel(io='temp1.xlsx',
                    engine='openpyxl',
                    sheet_name=['Sheet1', 'Sheet2'])
dfs
#
{'Sheet1':      Name  Age  Weight
 0    Alex   35      87
 1   Lesha   57      72
 2  Nastya   21      64,
 'Sheet2':     Name  Age  Weight
 0  Gosha   43      95
 1   Anna   24      65
 2   Lena   22      78}

Если таблицы в словаре имеют одинаковые атрибуты, то их можно объединить в один DataFrame. В Python это выглядит так:

pd.concat(dfs).reset_index(drop=True)
     Name  Age  Weight
0    Alex   35      87
1   Lesha   57      72
2  Nastya   21      64
3   Gosha   43      95
4    Anna   24      65
5    Lena   22      78

Указание диапазонов

Таблицы могут размещаться не в самом начале, а как, например, на рисунке ниже. Как видим, таблица располагается в диапазоне A:F.

Чтобы прочитать такую таблицу, нужно указать диапазон в аргументе usecols. Также дополнительно можно добавить header — номер заголовка таблицы, а также nrows — количество строк, которые нужно прочитать. В аргументе header всегда передается номер строки на единицу меньше, чем в Excel-файле, поскольку в Python индексация начинается с 0 (на рисунке это номер 5, тогда указываем 4):

pd.read_excel(io='temp1.xlsx',
              engine='openpyxl',
              usecols='D:F',
              header=4, # в excel это №5
              nrows=3)
#
    Name  Age  Weight
0  Gosha   43      95
1   Anna   24      65
2   Lena   22      78

Читаем таблицы в OpenPyXL

Pandas прочитывает только содержимое таблицы, но игнорирует метаданные: цвет заливки ячеек, примечания, стили таблицы и т.д. В таком случае пригодится библиотека OpenPyXL. Загрузка файлов осуществляется через функцию load_workbook, а к листам обращаться можно через квадратные скобки:

from openpyxl import load_workbook
wb = load_workbook('temp2.xlsx')
ws = wb['Лист1']
type(ws)
# openpyxl.worksheet.worksheet.Worksheet

Допустим, имеется Excel-файл с несколькими таблицами на листе (см. рисунок выше). Если бы мы использовали Pandas, то он бы выдал следующий результат:

pd.read_excel(io='temp2.xlsx',
              engine='openpyxl')
#
     Name  Age  Weight  Unnamed: 3 Name.1  Age.1  Weight.1
0    Alex   35      87         NaN  Tanya     25        66
1   Lesha   57      72         NaN  Gosha     43        77
2  Nastya   21      64         NaN  Tolya     32        54

Можно, конечно, заняться обработкой и привести таблицы в нормальный вид, а можно воспользоваться OpenPyXL, который хранит таблицу и его диапазон в словаре. Чтобы посмотреть этот словарь, нужно вызвать ws.tables.items. Вот так выглядит Python-код:

ws.tables.items()
wb = load_workbook('temp2.xlsx')
ws = wb['Лист1']
ws.tables.items()
#
[('Таблица1', 'A1:C4'), ('Таблица13', 'E1:G4')]

Обращаясь к каждому диапазону, можно проходить по каждой строке или столбцу, а внутри них – по каждой ячейке. Например, следующий код на Python таблицы объединяет строки в список, где первая строка уходит на заголовок, а затем преобразует их в DataFrame:

dfs = []
for table_name, value in ws.tables.items():
    table = ws[value]
    header, *body = [[cell.value for cell in row]
                      for row in table]
    df = pd.DataFrame(body, columns=header)
    dfs.append(df)

Если таблицы имеют одинаковые атрибуты, то их можно соединить в одну:

pd.concat(dfs)
#
     Name  Age  Weight
0    Alex   35      87
1   Lesha   57      72
2  Nastya   21      64
0   Tanya   25      66
1   Gosha   43      77
2   Tolya   32      54

Сохраняем метаданные таблицы

Как указано в коде выше, у ячейки OpenPyXL есть атрибут value, который хранит ее значение. Помимо value, можно получить тип ячейки (data_type), цвет заливки (fill), примечание (comment) и др.

Например, требуется сохранить данные о цвете ячеек. Для этого мы каждую ячейку с числами перезапишем в виде <значение,RGB>, где RGB — значение цвета в формате RGB (red, green, blue). Python-код выглядит следующим образом:

# _TYPES = {int:'n', float:'n', str:'s', bool:'b'}
data = []
for row in ws.rows:
    row_cells = []
    for cell in row:
        cell_value = cell.value
        if cell.data_type == 'n':
            cell_value = f"{cell_value},{cell.fill.fgColor.rgb}"
        row_cells.append(cell_value)
    data.append(row_cells)

Первым элементом списка является строка-заголовок, а все остальное уже значения таблицы:

pd.DataFrame(data[1:], columns=data[0])
#
     Name          Age       Weight
0    Alex  35,00000000  87,00000000
1   Lesha  57,00000000  72,FFFF0000
2  Nastya  21,FF00A933  64,00000000

Теперь представим атрибуты в виде индексов с помощью метода stack, а после разобьём все записи на значение и цвет методом str.split:

(pd.DataFrame(data[1:], columns=data[0])
 .set_index('Name')
 .stack()
 .str.split(',', expand=True)
)
#
                0         1
Name                       
Alex   Age     35  00000000
       Weight  87  00000000
Lesha  Age     57  00000000
       Weight  72  FFFF0000
Nastya Age     21  FF00A933
       Weight  64  0000000

Осталось только переименовать 0 и 1 на Value и Color, а также добавить атрибут Variable, который обозначит Вес и Возраст. Полный код на Python выглядит следующим образом:

(pd.DataFrame(data[1:], columns=data[0])
 .set_index('Name')
 .stack()
 .str.split(',', expand=True)
 .set_axis(['Value', 'Color'], axis=1)
 .rename_axis(index=['Name', 'Variable'])
 .reset_index()
)
#
     Name Variable Value     Color
0    Alex      Age    35  00000000
1    Alex   Weight    87  00000000
2   Lesha      Age    57  00000000
3   Lesha   Weight    72  FFFF0000
4  Nastya      Age    21  FF00A933
5  Nastya   Weight    64  00000000

Ещё больше подробностей о работе с таблицами в Pandas, а также их обработке на реальных примерах Data Science задач, вы узнаете на наших курсах по Python в лицензированном учебном центре обучения и повышения квалификации IT-специалистов в Москве.

Источники

1. https://xlrd.readthedocs.io/en/latest/
2. https://openpyxl.readthedocs.io/en/latest/
3. https://github.com/eea/odfpy
4. https://github.com/willtrnr/pyxlsb

Why learn to work with Excel with Python? Excel is one of the most popular and widely-used data tools; it’s hard to find an organization that doesn’t work with it in some way. From analysts, to sales VPs, to CEOs, various professionals use Excel for both quick stats and serious data crunching.

With Excel being so pervasive, data professionals must be familiar with it. Working with data in Python or R offers serious advantages over Excel’s UI, so finding a way to work with Excel using code is critical. Thankfully, there’s a great tool already out there for using Excel with Python called pandas.

Pandas has excellent methods for reading all kinds of data from Excel files. You can also export your results from pandas back to Excel, if that’s preferred by your intended audience. Pandas is great for other routine data analysis tasks, such as:

• quick Exploratory Data Analysis (EDA)
• drawing attractive plots
• feeding data into machine learning tools like scikit-learn
• building machine learning models on your data
• taking cleaned and processed data to any number of data tools

Pandas is better at automating data processing tasks than Excel, including processing Excel files.

In this tutorial, we are going to show you how to work with Excel files in pandas. We will cover the following concepts.

• setting up your computer with the necessary software
• reading in data from Excel files into pandas
• data exploration in pandas
• visualizing data in pandas using the matplotlib visualization library
• manipulating and reshaping data in pandas
• moving data from pandas into Excel

Note that this tutorial does not provide a deep dive into pandas. To explore pandas more, check out our course.

System Prerequisites

We will use Python 3 and Jupyter Notebook to demonstrate the code in this tutorial.In addition to Python and Jupyter Notebook, you will need the following Python modules:

• matplotlib — data visualization
• NumPy — numerical data functionality
• OpenPyXL — read/write Excel 2010 xlsx/xlsm files
• pandas — data import, clean-up, exploration, and analysis
• xlrd — read Excel data
• xlwt — write to Excel
• XlsxWriter — write to Excel (xlsx) files

There are multiple ways to get set up with all the modules. We cover three of the most common scenarios below.

• If you have Python installed via Anaconda package manager, you can install the required modules using the command conda install. For example, to install pandas, you would execute the command — conda install pandas.
• If you already have a regular, non-Anaconda Python installed on the computer, you can install the required modules using pip. Open your command line program and execute command pip install <module name> to install a module. You should replace <module name> with the actual name of the module you are trying to install. For example, to install pandas, you would execute command — pip install pandas.
• If you don’t have Python already installed, you should get it through the Anaconda package manager. Anaconda provides installers for Windows, Mac, and Linux Computers. If you choose the full installer, you will get all the modules you need, along with Python and pandas within a single package. This is the easiest and fastest way to get started.

The Data Set

In this tutorial, we will use a multi-sheet Excel file we created from Kaggle’s IMDB Scores data. You can download the file here.

Our Excel file has three sheets: ‘1900s,’ ‘2000s,’ and ‘2010s.’ Each sheet has data for movies from those years.

We will use this data set to find the ratings distribution for the movies, visualize movies with highest ratings and net earnings and calculate statistical information about the movies. We will be analyzing and exploring this data using Python and pandas, thus demonstrating pandas capabilities for working with Excel data in Python.

Read data from the Excel file

We need to first import the data from the Excel file into pandas. To do that, we start by importing the pandas module.

import pandas as pd

We then use the pandas’ read_excel method to read in data from the Excel file. The easiest way to call this method is to pass the file name. If no sheet name is specified then it will read the first sheet in the index (as shown below).

excel_file = 'movies.xls'
movies = pd.read_excel(excel_file)

Here, the read_excel method read the data from the Excel file into a pandas DataFrame object. Pandas defaults to storing data in DataFrames. We then stored this DataFrame into a variable called movies.

Pandas has a built-in DataFrame.head() method that we can use to easily display the first few rows of our DataFrame. If no argument is passed, it will display first five rows. If a number is passed, it will display the equal number of rows from the top.

movies.head()

5 rows × 25 columns

Excel files quite often have multiple sheets and the ability to read a specific sheet or all of them is very important. To make this easy, the pandas read_excel method takes an argument called sheetname that tells pandas which sheet to read in the data from. For this, you can either use the sheet name or the sheet number. Sheet numbers start with zero. If the sheetname argument is not given, it defaults to zero and pandas will import the first sheet.

By default, pandas will automatically assign a numeric index or row label starting with zero. You may want to leave the default index as such if your data doesn’t have a column with unique values that can serve as a better index. In case there is a column that you feel would serve as a better index, you can override the default behavior by setting index_col property to a column. It takes a numeric value for setting a single column as index or a list of numeric values for creating a multi-index.

In the below code, we are choosing the first column, ‘Title’, as index (index=0) by passing zero to the index_col argument.

movies_sheet1 = pd.read_excel(excel_file, sheetname=0, index_col=0)
movies_sheet1.head()

5 rows × 24 columns

As you noticed above, our Excel data file has three sheets. We already read the first sheet in a DataFrame above. Now, using the same syntax, we will read in rest of the two sheets too.

movies_sheet2 = pd.read_excel(excel_file, sheetname=1, index_col=0)
movies_sheet2.head()

5 rows × 24 columns

movies_sheet3 = pd.read_excel(excel_file, sheetname=2, index_col=0)
movies_sheet3.head()

5 rows × 24 columns

Since all the three sheets have similar data but for different recordsmovies, we will create a single DataFrame from all the three DataFrames we created above. We will use the pandas concat method for this and pass in the names of the three DataFrames we just created and assign the results to a new DataFrame object, movies. By keeping the DataFrame name same as before, we are over-writing the previously created DataFrame.

movies = pd.concat([movies_sheet1, movies_sheet2, movies_sheet3])

We can check if this concatenation by checking the number of rows in the combined DataFrame by calling the method shape on it that will give us the number of rows and columns.

movies.shape

(5042, 24)

Using the ExcelFile class to read multiple sheets

We can also use the ExcelFile class to work with multiple sheets from the same Excel file. We first wrap the Excel file using ExcelFile and then pass it to read_excel method.

xlsx = pd.ExcelFile(excel_file)
movies_sheets = []
for sheet in xlsx.sheet_names:
   movies_sheets.append(xlsx.parse(sheet))
movies = pd.concat(movies_sheets)

If you are reading an Excel file with a lot of sheets and are creating a lot of DataFrames, ExcelFile is more convenient and efficient in comparison to read_excel. With ExcelFile, you only need to pass the Excel file once, and then you can use it to get the DataFrames. When using read_excel, you pass the Excel file every time and hence the file is loaded again for every sheet. This can be a huge performance drag if the Excel file has many sheets with a large number of rows.

Exploring the data

Now that we have read in the movies data set from our Excel file, we can start exploring it using pandas. A pandas DataFrame stores the data in a tabular format, just like the way Excel displays the data in a sheet. Pandas has a lot of built-in methods to explore the DataFrame we created from the Excel file we just read in.

We already introduced the method head in the previous section that displays few rows from the top from the DataFrame. Let’s look at few more methods that come in handy while exploring the data set.

We can use the shape method to find out the number of rows and columns for the DataFrame.

movies.shape

(5042, 25)

This tells us our Excel file has 5042 records and 25 columns or observations. This can be useful in reporting the number of records and columns and comparing that with the source data set.

We can use the tail method to view the bottom rows. If no parameter is passed, only the bottom five rows are returned.

movies.tail()

5 rows × 25 columns

In Excel, you’re able to sort a sheet based on the values in one or more columns. In pandas, you can do the same thing with the sort_values method. For example, let’s sort our movies DataFrame based on the Gross Earnings column.

sorted_by_gross = movies.sort_values(['Gross Earnings'], ascending=False)

Since we have the data sorted by values in a column, we can do few interesting things with it. For example, we can display the top 10 movies by Gross Earnings.

sorted_by_gross["Gross Earnings"].head(10)

1867 760505847.0
1027 658672302.0
1263 652177271.0
610 623279547.0
611 623279547.0
1774 533316061.0
1281 474544677.0
226 460935665.0
1183 458991599.0
618 448130642.0
Name: Gross Earnings, dtype: float64

We can also create a plot for the top 10 movies by Gross Earnings. Pandas makes it easy to visualize your data with plots and charts through matplotlib, a popular data visualization library. With a couple lines of code, you can start plotting. Moreover, matplotlib plots work well inside Jupyter Notebooks since you can displace the plots right under the code.

First, we import the matplotlib module and set matplotlib to display the plots right in the Jupyter Notebook.

import matplotlib.pyplot as plt%matplotlib inline

We will draw a bar plot where each bar will represent one of the top 10 movies. We can do this by calling the plot method and setting the argument kind to barh. This tells matplotlib to draw a horizontal bar plot.

sorted_by_gross['Gross Earnings'].head(10).plot(kind="barh")
plt.show()

Let’s create a histogram of IMDB Scores to check the distribution of IMDB Scores across all movies. Histograms are a good way to visualize the distribution of a data set. We use the plot method on the IMDB Scores series from our movies DataFrame and pass it the argument.

movies['IMDB Score'].plot(kind="hist")
plt.show()

This data visualization suggests that most of the IMDB Scores fall between six and eight.

Getting statistical information about the data

Pandas has some very handy methods to look at the statistical data about our data set. For example, we can use the describe method to get a statistical summary of the data set.

movies.describe()

The describe method displays below information for each of the columns.

• the count or number of values
• mean
• standard deviation
• minimum, maximum
• 25%, 50%, and 75% quantile

Please note that this information will be calculated only for the numeric values.

We can also use the corresponding method to access this information one at a time. For example, to get the mean of a particular column, you can use the mean method on that column.

movies["Gross Earnings"].mean()

48468407.526809327

Just like mean, there are methods available for each of the statistical information we want to access. You can read about these methods in our free pandas cheat sheet.

Reading files with no header and skipping records

Earlier in this tutorial, we saw some ways to read a particular kind of Excel file that had headers and no rows that needed skipping. Sometimes, the Excel sheet doesn’t have any header row. For such instances, you can tell pandas not to consider the first row as header or columns names. And If the Excel sheet’s first few rows contain data that should not be read in, you can ask the read_excel method to skip a certain number of rows, starting from the top.

For example, look at the top few rows of this Excel file.

This file obviously has no header and first four rows are not actual records and hence should not be read in. We can tell read_excel there is no header by setting argument header to None and we can skip first four rows by setting argument skiprows to four.

movies_skip_rows = pd.read_excel("movies-no-header-skip-rows.xls", header=None, skiprows=4)
movies_skip_rows.head(5)

5 rows × 25 columns

We skipped four rows from the sheet and used none of the rows as the header. Also, notice that one can combine different options in a single read statement. To skip rows at the bottom of the sheet, you can use option skip_footer, which works just like skiprows, the only difference being the rows are counted from the bottom upwards.

The column names in the previous DataFrame are numeric and were allotted as default by the pandas. We can rename the column names to descriptive ones by calling the method columns on the DataFrame and passing the column names as a list.

movies_skip_rows.columns = ['Title', 'Year', 'Genres', 'Language', 'Country', 'Content Rating', 'Duration', 'Aspect Ratio', 'Budget', 'Gross Earnings', 'Director', 'Actor 1', 'Actor 2', 'Actor 3', 'Facebook Likes - Director', 'Facebook Likes - Actor 1', 'Facebook Likes - Actor 2', 'Facebook Likes - Actor 3', 'Facebook Likes - cast Total', 'Facebook likes - Movie', 'Facenumber in posters', 'User Votes', 'Reviews by Users', 'Reviews by Crtiics', 'IMDB Score']
movies_skip_rows.head()

5 rows × 25 columns

Now that we have seen how to read a subset of rows from the Excel file, we can learn how to read a subset of columns.

Reading a subset of columns

Although read_excel defaults to reading and importing all columns, you can choose to import only certain columns. By passing parse_cols=6, we are telling the read_excel method to read only the first columns till index six or first seven columns (the first column being indexed zero).

movies_subset_columns = pd.read_excel(excel_file, parse_cols=6)
movies_subset_columns.head()

Alternatively, you can pass in a list of numbers, which will let you import columns at particular indexes.

Applying formulas on the columns

One of the much-used features of Excel is to apply formulas to create new columns from existing column values. In our Excel file, we have Gross Earnings and Budget columns. We can get Net earnings by subtracting Budget from Gross earnings. We could then apply this formula in the Excel file to all the rows. We can do this in pandas also as shown below.

movies["Net Earnings"] = movies["Gross Earnings"] - movies["Budget"]

Above, we used pandas to create a new column called Net Earnings, and populated it with the difference of Gross Earnings and Budget. It’s worth noting the difference here in how formulas are treated in Excel versus pandas. In Excel, a formula lives in the cell and updates when the data changes — with Python, the calculations happen and the values are stored — if Gross Earnings for one movie was manually changed, Net Earnings won’t be updated.

Let’s use the sort_values method to sort the data by the new column we created and visualize the top 10 movies by Net Earnings.

sorted_movies = movies[['Net Earnings']].sort_values(['Net Earnings'], ascending=[False])sorted_movies.head(10)['Net Earnings'].plot.barh()
plt.show()

Pivot Table in pandas

Advanced Excel users also often use pivot tables. A pivot table summarizes the data of another table by grouping the data on an index and applying operations such as sorting, summing, or averaging. You can use this feature in pandas too.

We need to first identify the column or columns that will serve as the index, and the column(s) on which the summarizing formula will be applied. Let’s start small, by choosing Year as the index column and Gross Earnings as the summarization column and creating a separate DataFrame from this data.

movies_subset = movies[['Year', 'Gross Earnings']]
movies_subset.head()

We now call pivot_table on this subset of data. The method pivot_table takes a parameter index. As mentioned, we want to use Year as the index.

earnings_by_year = movies_subset.pivot_table(index=['Year'])
earnings_by_year.head()

This gave us a pivot table with grouping on Year and summarization on the sum of Gross Earnings. Notice, we didn’t need to specify Gross Earnings column explicitly as pandas automatically identified it the values on which summarization should be applied.

We can use this pivot table to create some data visualizations. We can call the plot method on the DataFrame to create a line plot and call the show method to display the plot in the notebook.

earnings_by_year.plot()
plt.show()

We saw how to pivot with a single column as the index. Things will get more interesting if we can use multiple columns. Let’s create another DataFrame subset but this time we will choose the columns, Country, Language and Gross Earnings.

movies_subset = movies[['Country', 'Language', 'Gross Earnings']]
movies_subset.head()

We will use columns Country and Language as the index for the pivot table. We will use Gross Earnings as summarization table, however, we do not need to specify this explicitly as we saw earlier.

earnings_by_co_lang = movies_subset.pivot_table(index=['Country', 'Language'])
earnings_by_co_lang.head()

Let’s visualize this pivot table with a bar plot. Since there are still few hundred records in this pivot table, we will plot just a few of them.

earnings_by_co_lang.head(20).plot(kind='bar', figsize=(20,8))
plt.show()

Exporting the results to Excel

If you’re going to be working with colleagues who use Excel, saving Excel files out of pandas is important. You can export or write a pandas DataFrame to an Excel file using pandas to_excel method. Pandas uses the xlwt Python module internally for writing to Excel files. The to_excel method is called on the DataFrame we want to export.We also need to pass a filename to which this DataFrame will be written.

movies.to_excel('output.xlsx')

By default, the index is also saved to the output file. However, sometimes the index doesn’t provide any useful information. For example, the movies DataFrame has a numeric auto-increment index, that was not part of the original Excel data.

movies.head()

5 rows × 26 columns

You can choose to skip the index by passing along index-False.

movies.to_excel('output.xlsx', index=False)

We need to be able to make our output files look nice before we can send it out to our co-workers. We can use pandas ExcelWriter class along with the XlsxWriter Python module to apply the formatting.

We can do use these advanced output options by creating a ExcelWriter object and use this object to write to the EXcel file.

writer = pd.ExcelWriter('output.xlsx', engine='xlsxwriter')
movies.to_excel(writer, index=False, sheet_name='report')
workbook = writer.bookworksheet = writer.sheets['report']

We can apply customizations by calling add_format on the workbook we are writing to. Here we are setting header format as bold.

header_fmt = workbook.add_format({'bold': True})
worksheet.set_row(0, None, header_fmt)

Finally, we save the output file by calling the method save on the writer object.

writer.save()

As an example, we saved the data with column headers set as bold. And the saved file looks like the image below.

Like this, one can use XlsxWriter to apply various formatting to the output Excel file.

Conclusion

Pandas is not a replacement for Excel. Both tools have their place in the data analysis workflow and can be very great companion tools. As we demonstrated, pandas can do a lot of complex data analysis and manipulations, which depending on your need and expertise, can go beyond what you can achieve if you are just using Excel. One of the major benefits of using Python and pandas over Excel is that it helps you automate Excel file processing by writing scripts and integrating with your automated data workflow. Pandas also has excellent methods for reading all kinds of data from Excel files. You can export your results from pandas back to Excel too if that’s preferred by your intended audience.

On the other hand, Excel is a such a widely used data tool, it’s not a wise to ignore it. Acquiring expertise in both pandas and Excel and making them work together gives you skills that can help you stand out in your organization.

If you’d like to learn more about this topic, check out Dataquest’s interactive Pandas and NumPy Fundamentals course, and our Data Analyst in Python, and Data Scientist in Python paths that will help you become job-ready in around 6 months.

Excel sheets are very instinctive and user-friendly, which makes them ideal for manipulating large datasets even for less technical folks. If you are looking for places to learn to manipulate and automate stuff in excel files using Python, look no more. You are at the right place.

Python Pandas With Excel Sheet

In this article, you will learn how to use Pandas to work with Excel spreadsheets. At the end of the article, you will have the knowledge of:

• Necessary modules are needed for this and how to set them up in your system.
• Reading data from excel files into pandas using Python.
• Exploring the data from excel files in Pandas.
• Using functions to manipulate and reshape the data in Pandas.

Installation

To install Pandas in Anaconda, we can use the following command in Anaconda Terminal:

conda install pandas

To install Pandas in regular Python (Non-Anaconda), we can use the following command in the command prompt:

pip install pandas

Getting Started

First of all, we need to import the Pandas module which can be done by running the command: Pandas

Input File: Let’s suppose the excel file looks like this 

Sheet 1: 

Sheet 2: 

Now we can import the excel file using the read_excel function in Pandas. The second statement reads the data from excel and stores it into a pandas Data Frame which is represented by the variable newData. If there are multiple sheets in the excel workbook, the command will import data of the first sheet. To make a data frame with all the sheets in the workbook, the easiest method is to create different data frames separately and then concatenate them. The read_excel method takes argument sheet_name and index_col where we can specify the sheet of which the data frame should be made of and index_col specifies the title column, as is shown below: 

Output: 

Example: 

The third statement concatenates both sheets. Now to check the whole data frame, we can simply run the following command: 

Output: 

To view 5 columns from the top and from the bottom of the data frame, we can run the command. This head() and tail() method also take arguments as numbers for the number of columns to show. 

Output: 

The shape() method can be used to view the number of rows and columns in the data frame as follows: 

Output: 

If any column contains numerical data, we can sort that column using the sort_values() method in pandas as follows: 

Now, let’s suppose we want the top 5 values of the sorted column, we can use the head() method here: 

Output: 

 We can do that with any numerical column of the data frame as shown below: 

Output: 

Now, suppose our data is mostly numerical. We can get the statistical information like mean, max, min, etc. about the data frame using the describe() method as shown below: 

Output: 

This can also be done separately for all the numerical columns using the following command: 

Output: 

Other statistical information can also be calculated using the respective methods. Like in excel, formulas can also be applied and calculated columns can be created as follows: 

Output: 

After operating on the data in the data frame, we can export the data back to an excel file using the method to_excel. For this we need to specify an output excel file where the transformed data is to be written, as shown below: 

Output: